A
CGIAR Generation Challenge Programme project.....Cultivating Genetic Diversity
for the Resource Poor
Note: Every year the journal of Nucleic Acids Research publishes a free special issue of Databases. See the current issue here
| Database or Compilation | Crop concentration | Type of data or tools (not inclusive) | Comments | |
| Gramene | rice, wheat, maize, sorghum, oat, barley, sugarcane | mapping, taxonomy, comparative maps, annotation, QTL | ||
| Solanaceae Genome Network (SGN) | tomato, wild relatives, other Solanums, coffee, more | EST, sequence,map, gene, mutants, orthologs, annotation, comparative maps, SSR, more | info on the international SOL project | |
| Natl Center for Biotechnology Information (NCBI) | many | sequence, gene, annotation | software tools for analyzing genome data, databases, literature, many resources | |
| Arizona Genome Institute | links to cotton, barley, rice, sorghum,maize | Also links to other genome centers, literature, and software tools | ||
| Brassica IGF Project | Brassica | ESTs, BACs | Also links to other Brassica collaborators | |
| Munich Information Center for Protein Sequences (MIPS) | many | protein sequences, retrieval and analysis, expression analysis | ||
| Comparative Grass Genomics Center (CGGC) | sorghum | ESTs,gene,physical mapping,BACs, more | ||
| Laboratory for Genomics and Bioinformatics | sorghum, pine | ESTs, expression data, more | ||
| MaizeGDB | maize | ESTs, physical mapping, BACs, gene, annotation, SSRs | Also stock lists, tools | |
| The Arabidopsis Information Resource (TAIR) | arabidopsis | sequence, BACs,physical mapping, ESTs,annotation | Many tools available | |
| Vivo, the Virtual Life Sciences Library | none | a compilation of good sites | ||
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